Sobic.006G077000.2

Description : S-locus lectin protein kinase family protein

Gene families : OG_01_0000036 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000036_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G077000.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G077000.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_154
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_119

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004672	protein kinase activity	ISM	GOs from InterProScan
MF	GO:0004674	protein serine/threonine kinase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0006468	protein phosphorylation	ISM	GOs from InterProScan
BP	GO:0006793	phosphorus metabolic process	None	Extended
BP	GO:0006796	phosphate-containing compound metabolic process	None	Extended
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008037	cell recognition	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016301	kinase activity	None	Extended
BP	GO:0016310	phosphorylation	None	Extended
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016772	transferase activity, transferring phosphorus-containing groups	None	Extended
MF	GO:0016773	phosphotransferase activity, alcohol group as acceptor	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
BP	GO:0036211	protein modification process	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0048544	recognition of pollen	ISM	GOs from InterProScan
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR003609	Pan_app	SMART	353	426
IPR000719	Prot_kinase_dom	ProSiteProfiles	495	775
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	501	523
IPR024171	SRK-like_kinase	PIRSF	1	795
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	479	768
IPR036426	Bulb-type_lectin_dom_sf	Gene3D	22	152
IPR001480	Bulb-type_lectin_dom	SMART	32	155
IPR001480	Bulb-type_lectin_dom	ProSiteProfiles	26	151
IPR008271	Ser/Thr_kinase_AS	ProSitePatterns	614	626
IPR001480	Bulb-type_lectin_dom	Pfam	78	181
IPR003609	Pan_app	Pfam	354	412
IPR000858	S_locus_glycoprot_dom	Pfam	212	320
IPR000719	Prot_kinase_dom	Pfam	498	765
IPR036426	Bulb-type_lectin_dom_sf	SUPERFAMILY	79	185
IPR000719	Prot_kinase_dom	SMART	495	767
IPR003609	Pan_app	ProSiteProfiles	344	427
IPR001480	Bulb-type_lectin_dom	CDD	34	155

No CAZYmes available for this sequence

External Links

No external refs found!

Sobic.006G077000.2

Expression Profile

Co-expression Networks

Functional Annotation