Sevir.8G246800.1

Description : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Gene families : OG_01_0001233 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001233_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G246800.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_69

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	ISM	GOs from InterProScan
MF	GO:0016831	carboxy-lyase activity	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	ISM	GOs from InterProScan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR002129	PyrdxlP-dep_de-COase	Pfam	46	178
IPR015424	PyrdxlP-dep_Trfase	SUPERFAMILY	13	181
IPR015421	PyrdxlP-dep_Trfase_major	Gene3D	94	194
IPR010977	Aromatic_deC	PRINTS	105	123
IPR010977	Aromatic_deC	PRINTS	40	57
IPR010977	Aromatic_deC	PRINTS	17	36
IPR010977	Aromatic_deC	PRINTS	84	103
IPR010977	Aromatic_deC	PRINTS	58	77
IPR010977	Aromatic_deC	PRINTS	124	143
IPR010977	Aromatic_deC	PRINTS	149	169

No CAZYmes available for this sequence

External Links

No external refs found!