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  5. Sobic.006G084400.1

Sobic.006G084400.1


Description : thylakoidal ascorbate peroxidase


Gene families : OG_01_0000305 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000305_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G084400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G084400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_433
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_228


Type GO Term Name Evidence Source
MF GO:0004601 peroxidase activity ISM GOs from InterProScan
BP GO:0006979 response to oxidative stress ISM GOs from InterProScan
MF GO:0020037 heme binding ISM GOs from InterProScan
BP GO:0034599 cellular response to oxidative stress ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002016 Haem_peroxidase ProSiteProfiles 97 344
IPR002016 Haem_peroxidase PRINTS 224 239
IPR002016 Haem_peroxidase PRINTS 264 279
IPR002016 Haem_peroxidase PRINTS 156 173
IPR002016 Haem_peroxidase PRINTS 94 108
IPR002016 Haem_peroxidase PRINTS 174 186
IPR010255 Haem_peroxidase_sf SUPERFAMILY 68 333
IPR002207 Peroxidase_I PRINTS 73 93
IPR002207 Peroxidase_I PRINTS 174 186
IPR002207 Peroxidase_I PRINTS 293 317
IPR002207 Peroxidase_I PRINTS 94 109
IPR002207 Peroxidase_I PRINTS 155 173
IPR044831 Ccp1-like PANTHER 1 340
IPR002016 Haem_peroxidase Pfam 81 312
IPR019793 Peroxidases_heam-ligand_BS ProSitePatterns 224 234
HMM Family HMM Length Query Length e-Value Query Start Query End
AA2 255 345 1.7e-53 84 332
No external refs found!