Sobic.006G087100.1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0004791 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004791_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G087100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G087100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_228

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000571	Znf_CCCH	ProSiteProfiles	272	298
IPR000571	Znf_CCCH	SMART	128	154
IPR000571	Znf_CCCH	SMART	171	197
IPR000571	Znf_CCCH	SMART	93	120
IPR000571	Znf_CCCH	SMART	304	329
IPR000571	Znf_CCCH	SMART	272	297
IPR000571	Znf_CCCH	SMART	200	225
IPR000571	Znf_CCCH	ProSiteProfiles	304	330
IPR000571	Znf_CCCH	ProSiteProfiles	170	198
IPR000571	Znf_CCCH	ProSiteProfiles	93	121
IPR000571	Znf_CCCH	ProSiteProfiles	205	226
IPR000571	Znf_CCCH	ProSiteProfiles	128	155

No CAZYmes available for this sequence

External Links

No external refs found!