Sobic.006G117100.1

Description : beta glucosidase 13

Gene families : OG_01_0006293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006293_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G117100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G117100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_92
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_727

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001360	Glyco_hydro_1	Pfam	39	511
IPR001360	Glyco_hydro_1	PANTHER	11	511
IPR001360	Glyco_hydro_1	PRINTS	339	353
IPR001360	Glyco_hydro_1	PRINTS	459	476
IPR001360	Glyco_hydro_1	PRINTS	415	423
IPR001360	Glyco_hydro_1	PRINTS	483	495
IPR001360	Glyco_hydro_1	PRINTS	438	449
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	36	511
IPR033132	Glyco_hydro_1_N_CS	ProSitePatterns	45	59

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
GH1	429	513	6.6e-184	38	511

External Links

No external refs found!