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  5. Sobic.006G117600.1

Sobic.006G117600.1


Description : beta glucosidase 12


Gene families : OG_01_0006293 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006293_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G117600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G117600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_118
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_56


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001360 Glyco_hydro_1 PRINTS 332 346
IPR001360 Glyco_hydro_1 PRINTS 408 416
IPR001360 Glyco_hydro_1 PRINTS 452 469
IPR001360 Glyco_hydro_1 PRINTS 431 442
IPR001360 Glyco_hydro_1 PRINTS 476 488
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 29 504
IPR001360 Glyco_hydro_1 Pfam 32 504
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 38 52
IPR001360 Glyco_hydro_1 PANTHER 2 504
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 506 8.4e-179 31 504
No external refs found!