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  5. Sobic.006G123000.1

Sobic.006G123000.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0005766 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005766_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G123000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G123000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_206
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_197


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 144 302
IPR001680 WD40_rpt ProSiteProfiles 258 288
IPR001680 WD40_rpt ProSiteProfiles 216 257
IPR001680 WD40_rpt ProSiteProfiles 319 360
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 145 466
IPR020472 G-protein_beta_WD-40_rep PRINTS 452 466
IPR020472 G-protein_beta_WD-40_rep PRINTS 383 397
IPR020472 G-protein_beta_WD-40_rep PRINTS 235 249
IPR001680 WD40_rpt ProSiteProfiles 365 395
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 303 470
IPR001680 WD40_rpt Pfam 363 395
IPR001680 WD40_rpt Pfam 218 247
IPR001680 WD40_rpt Pfam 253 288
IPR001680 WD40_rpt SMART 403 465
IPR001680 WD40_rpt SMART 133 174
IPR001680 WD40_rpt SMART 312 351
IPR001680 WD40_rpt SMART 209 248
IPR001680 WD40_rpt SMART 358 396
IPR001680 WD40_rpt SMART 251 289
IPR045182 JINGUBANG-like PANTHER 25 469

No CAZYmes available for this sequence

No external refs found!