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  5. Sobic.006G140600.1

Sobic.006G140600.1


Description : CLIP-associated protein


Gene families : OG_01_0004007 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004007_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G140600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G140600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_185
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_84


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011989 ARM-like Gene3D 1213 1434
IPR011989 ARM-like Gene3D 1 223
IPR011989 ARM-like Gene3D 266 506
IPR011989 ARM-like Gene3D 800 1022
IPR034085 TOG SMART 1195 1435
IPR034085 TOG SMART 270 513
IPR034085 TOG SMART 2 225
IPR034085 TOG SMART 785 1027
IPR000357 HEAT Pfam 161 190
IPR021133 HEAT_type_2 ProSiteProfiles 161 199
IPR024395 CLASP_N_dom Pfam 285 500
IPR016024 ARM-type_fold SUPERFAMILY 3 1417

No CAZYmes available for this sequence

No external refs found!