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  5. Sobic.006G141600.1

Sobic.006G141600.1


Description : Isocitrate/isopropylmalate dehydrogenase family protein


Gene families : OG_01_0007688 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0007688_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G141600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G141600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_242
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_134


Type GO Term Name Evidence Source
MF GO:0000287 magnesium ion binding ISM GOs from InterProScan
MF GO:0004450 isocitrate dehydrogenase (NADP+) activity ISM GOs from InterProScan
BP GO:0006102 isocitrate metabolic process ISM GOs from InterProScan
MF GO:0016616 oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor ISM GOs from InterProScan
MF GO:0051287 NAD binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024084 IsoPropMal-DH-like_dom SMART 84 473
IPR019818 IsoCit/isopropylmalate_DH_CS ProSitePatterns 344 363
IPR024084 IsoPropMal-DH-like_dom Pfam 80 473
IPR004790 Isocitrate_DH_NADP PANTHER 60 486
IPR004790 Isocitrate_DH_NADP TIGRFAM 78 482
IPR004790 Isocitrate_DH_NADP PIRSF 58 483

No CAZYmes available for this sequence

No external refs found!