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  5. Sobic.006G142299.1

Sobic.006G142299.1


Description : glycoside hydrolase family 28 protein / polygalacturonase (pectinase) family protein


Gene families : OG_01_0005004 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005004_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G142299.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G142299.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_351


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0004523 RNA-DNA hybrid ribonuclease activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR012337 RNaseH-like_sf SUPERFAMILY 59 138
IPR002156 RNaseH_domain Pfam 64 138
IPR044730 RNase_H-like_dom_plant CDD 63 138
IPR036397 RNaseH_sf Gene3D 60 147

No CAZYmes available for this sequence

No external refs found!