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  5. Sobic.006G145800.1

Sobic.006G145800.1


Description : beta-glucosidase 45


Gene families : OG_01_0001092 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001092_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G145800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G145800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_110
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_107


Type GO Term Name Evidence Source
MF GO:0004553 hydrolase activity, hydrolyzing O-glycosyl compounds ISM GOs from InterProScan
BP GO:0005975 carbohydrate metabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR017853 Glycoside_hydrolase_SF SUPERFAMILY 24 498
IPR001360 Glyco_hydro_1 PANTHER 1 507
IPR001360 Glyco_hydro_1 Pfam 27 498
IPR001360 Glyco_hydro_1 PRINTS 472 484
IPR001360 Glyco_hydro_1 PRINTS 427 438
IPR001360 Glyco_hydro_1 PRINTS 326 340
IPR001360 Glyco_hydro_1 PRINTS 448 465
IPR001360 Glyco_hydro_1 PRINTS 404 412
IPR033132 Glyco_hydro_1_N_CS ProSitePatterns 34 48
HMM Family HMM Length Query Length e-Value Query Start Query End
GH1 429 523 2.7e-167 27 498
No external refs found!