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  5. Sobic.006G161300.1

Sobic.006G161300.1


Description : beta vacuolar processing enzyme


Gene families : OG_01_0001729 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001729_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G161300.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G161300.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_128


Type GO Term Name Evidence Source
MF GO:0004197 cysteine-type endopeptidase activity ISM GOs from InterProScan
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008233 peptidase activity ISM GOs from InterProScan
BP GO:0051603 proteolysis involved in protein catabolic process ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043577 AE PIRSF 3 493
IPR001096 Peptidase_C13 PANTHER 5 490
IPR001096 Peptidase_C13 PIRSF 6 493
IPR001096 Peptidase_C13 Pfam 59 330
IPR001096 Peptidase_C13 PRINTS 209 225
IPR001096 Peptidase_C13 PRINTS 85 114
IPR001096 Peptidase_C13 PRINTS 160 179
IPR001096 Peptidase_C13 PRINTS 132 147
IPR001096 Peptidase_C13 PRINTS 60 84

No CAZYmes available for this sequence

No external refs found!