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  5. Sobic.006G170500.2

Sobic.006G170500.2


Description : tonoplast intrinsic protein 5;1


Gene families : OG_01_0050800 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0050800_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G170500.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G170500.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_40
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_77


Type GO Term Name Evidence Source
MF GO:0015267 channel activity ISM GOs from InterProScan
CC GO:0016020 membrane ISM GOs from InterProScan
BP GO:0055085 transmembrane transport ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000425 MIP Pfam 17 244
IPR034294 Aquaporin_transptr PANTHER 5 266
IPR022357 MIP_CS ProSitePatterns 84 92
IPR023271 Aquaporin-like Gene3D 5 256
IPR023271 Aquaporin-like SUPERFAMILY 15 251
IPR000425 MIP PRINTS 190 212
IPR000425 MIP PRINTS 103 122
IPR000425 MIP PRINTS 21 40
IPR000425 MIP PRINTS 148 166
IPR000425 MIP PRINTS 66 90
IPR000425 MIP PRINTS 227 247

No CAZYmes available for this sequence

No external refs found!