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  5. Sobic.006G173500.1

Sobic.006G173500.1


Description : VASCULAR-RELATED NAC-DOMAIN 6


Gene families : OG_01_0016169 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016169_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G173500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G173500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_300
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_108


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001878 Znf_CCHC ProSiteProfiles 147 162
IPR001878 Znf_CCHC ProSiteProfiles 174 189
IPR036875 Znf_CCHC_sf SUPERFAMILY 62 111
IPR001878 Znf_CCHC Pfam 69 85
IPR001878 Znf_CCHC Pfam 120 135
IPR001878 Znf_CCHC Pfam 147 162
IPR036875 Znf_CCHC_sf SUPERFAMILY 118 164
IPR025836 Zn_knuckle_CX2CX4HX4C Pfam 93 109
IPR001878 Znf_CCHC ProSiteProfiles 120 135
IPR001878 Znf_CCHC SMART 119 135
IPR001878 Znf_CCHC SMART 69 85
IPR001878 Znf_CCHC SMART 146 162
IPR001878 Znf_CCHC SMART 173 189
IPR001878 Znf_CCHC SMART 94 110

No CAZYmes available for this sequence

No external refs found!