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  5. Sobic.006G181000.1

Sobic.006G181000.1


Description : Stabilizer of iron transporter SufD / Polynucleotidyl transferase


Gene families : OG_01_0000015 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000015_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G181000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G181000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_326
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_196


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR003165 Piwi ProSiteProfiles 707 1028
IPR003100 PAZ_dom Pfam 421 546
IPR003100 PAZ_dom ProSiteProfiles 417 531
IPR003100 PAZ_dom SMART 421 553
IPR012337 RNaseH-like_sf SUPERFAMILY 702 1029
IPR036085 PAZ_dom_sf SUPERFAMILY 220 568
IPR032473 Argonaute_Mid_dom Pfam 614 689
IPR036397 RNaseH_sf Gene3D 776 1077
IPR045246 Piwi_ago-like CDD 575 1027
IPR014811 ArgoL1 Pfam 365 415
IPR024357 Argonaut_Gly-rich Pfam 97 198
IPR014811 ArgoL1 SMART 364 416
IPR032472 ArgoL2 Pfam 557 603
IPR032474 Argonaute_N Pfam 217 355
IPR003165 Piwi Pfam 708 1027
IPR003165 Piwi SMART 707 1028

No CAZYmes available for this sequence

No external refs found!