1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G181500.1

Sobic.006G181500.1


Description : eukaryotic translation initiation factor 3G1


Gene families : OG_01_0004720 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004720_tree

Sequence : cds (download), rna (download), protein (download)


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G181500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G181500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_174
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_41


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
MF GO:0003743 translation initiation factor activity ISM GOs from InterProScan
CC GO:0005737 cytoplasm ISM GOs from InterProScan
CC GO:0005852 eukaryotic translation initiation factor 3 complex ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR024675 eIF3g_N CDD 45 166
IPR024675 eIF3g_N Pfam 39 167
IPR000504 RRM_dom Pfam 221 287
IPR035979 RBD_domain_sf SUPERFAMILY 216 298
IPR000504 RRM_dom SMART 220 293
IPR017334 eIF3_g PIRSF 5 299
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 193 299
IPR034240 eIF3G_RRM CDD 220 296
IPR000504 RRM_dom ProSiteProfiles 219 297
IPR017334 eIF3_g Hamap 13 299

No CAZYmes available for this sequence

No external refs found!