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  5. Sobic.006G183200.1

Sobic.006G183200.1


Description : homeodomain GLABROUS 1


Gene families : OG_01_0002053 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002053_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G183200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G183200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_268
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32


Type GO Term Name Evidence Source
MF GO:0000981 DNA-binding transcription factor activity, RNA polymerase II-specific ISM GOs from InterProScan
MF GO:0003677 DNA binding ISM GOs from InterProScan
BP GO:0006355 regulation of DNA-templated transcription ISM GOs from InterProScan
MF GO:0008289 lipid binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001356 Homeobox_dom Pfam 103 158
IPR017970 Homeobox_CS ProSitePatterns 135 158
IPR042160 GLABRA2/ANL2/PDF2/ATML1-like PANTHER 43 800
IPR001356 Homeobox_dom SMART 101 164
IPR002913 START_lipid-bd_dom SMART 314 542
IPR002913 START_lipid-bd_dom Pfam 315 542
IPR001356 Homeobox_dom ProSiteProfiles 100 160
IPR009057 Homeobox-like_sf SUPERFAMILY 92 160
IPR023393 START-like_dom_sf Gene3D 312 525
IPR001356 Homeobox_dom CDD 101 161
IPR002913 START_lipid-bd_dom ProSiteProfiles 305 545
IPR000047 HTH_motif PRINTS 140 156
IPR000047 HTH_motif PRINTS 131 140

No CAZYmes available for this sequence

No external refs found!