Sobic.006G199500.2

Description : NDR1/HIN1-like 8

Gene families : OG_01_0008184 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008184_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G199500.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G199500.2
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_84
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_630

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004842	ubiquitin-protein transferase activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0016567	protein ubiquitination	ISM	GOs from InterProScan
MF	GO:0016740	transferase activity	None	Extended
MF	GO:0016746	acyltransferase activity	None	Extended
MF	GO:0016755	aminoacyltransferase activity	None	Extended
BP	GO:0019538	protein metabolic process	None	Extended
MF	GO:0019787	ubiquitin-like protein transferase activity	None	Extended
BP	GO:0032446	protein modification by small protein conjugation	None	Extended
BP	GO:0036211	protein modification process	None	Extended
BP	GO:0043170	macromolecule metabolic process	None	Extended
BP	GO:0043412	macromolecule modification	None	Extended
BP	GO:0043687	post-translational protein modification	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0070647	protein modification by small protein conjugation or removal	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0140096	catalytic activity, acting on a protein	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001841	Znf_RING	SMART	452	536
IPR001841	Znf_RING	SMART	288	379
IPR002867	IBR_dom	Pfam	444	485
IPR002867	IBR_dom	Pfam	356	414
IPR017907	Znf_RING_CS	ProSitePatterns	305	314
IPR001841	Znf_RING	ProSiteProfiles	288	336
IPR002867	IBR_dom	SMART	356	414
IPR002867	IBR_dom	SMART	434	496
IPR031127	E3_UB_ligase_RBR	PANTHER	16	563
IPR044066	TRIAD_supradom	ProSiteProfiles	284	500
IPR016135	UBQ-conjugating_enzyme/RWD	Gene3D	76	234
IPR013083	Znf_RING/FYVE/PHD	Gene3D	284	372
IPR006575	RWD_dom	ProSiteProfiles	90	233
IPR016135	UBQ-conjugating_enzyme/RWD	SUPERFAMILY	82	228
IPR006575	RWD_dom	Pfam	87	229
IPR006575	RWD_dom	SMART	90	233

No CAZYmes available for this sequence

External Links

No external refs found!