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  5. Sobic.006G208400.1

Sobic.006G208400.1


Description : nuclear pore complex protein-related


Gene families : OG_01_0008307 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008307_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G208400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G208400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_195
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_188


Type GO Term Name Evidence Source
BP GO:0000055 ribosomal large subunit export from nucleus ISM GOs from InterProScan
BP GO:0000056 ribosomal small subunit export from nucleus ISM GOs from InterProScan
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0006913 nucleocytoplasmic transport ISM GOs from InterProScan
MF GO:0017056 structural constituent of nuclear pore ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR019321 Nucleoporin_Nup88 Pfam 502 786
IPR019321 Nucleoporin_Nup88 Pfam 97 237
IPR037700 NUP88/NUP82 PANTHER 61 845
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 144 290

No CAZYmes available for this sequence

No external refs found!