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  5. Sobic.006G219000.1

Sobic.006G219000.1


Description : F-box protein 2


Gene families : OG_01_0002071 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0002071_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G219000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G219000.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_339


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 187 409
IPR001680 WD40_rpt ProSiteProfiles 372 406
IPR001810 F-box_dom SMART 105 145
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 410 532
IPR001810 F-box_dom Pfam 102 143
IPR001680 WD40_rpt ProSiteProfiles 293 332
IPR001680 WD40_rpt SMART 363 404
IPR001680 WD40_rpt SMART 326 361
IPR001680 WD40_rpt SMART 414 451
IPR001680 WD40_rpt SMART 475 512
IPR001680 WD40_rpt SMART 286 323
IPR001680 WD40_rpt SMART 190 229
IPR001680 WD40_rpt SMART 232 269
IPR001810 F-box_dom ProSiteProfiles 99 145
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 194 515
IPR001680 WD40_rpt ProSiteProfiles 197 238
IPR001680 WD40_rpt Pfam 194 229
IPR001680 WD40_rpt Pfam 295 323
IPR036047 F-box-like_dom_sf SUPERFAMILY 93 181
IPR020472 G-protein_beta_WD-40_rep PRINTS 310 324
IPR020472 G-protein_beta_WD-40_rep PRINTS 216 230
IPR020472 G-protein_beta_WD-40_rep PRINTS 499 513

No CAZYmes available for this sequence

No external refs found!