Sobic.006G220400.1

Description : Polynucleotidyl transferase, ribonuclease H-like superfamily protein

Gene families : OG_01_0003376 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003376_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G220400.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G220400.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_143
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_147

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	ISM	GOs from InterProScan
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004518	nuclease activity	None	Extended
MF	GO:0004527	exonuclease activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0008408	3'-5' exonuclease activity	ISM	GOs from InterProScan
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016788	hydrolase activity, acting on ester bonds	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR040393	TREX1/2	PANTHER	3	283
IPR012337	RNaseH-like_sf	SUPERFAMILY	83	258
IPR013520	Exonuclease_RNaseT/DNA_pol3	SMART	84	264
IPR036397	RNaseH_sf	Gene3D	83	276
IPR013520	Exonuclease_RNaseT/DNA_pol3	Pfam	86	255

No CAZYmes available for this sequence

External Links

No external refs found!