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  5. Sobic.006G229901.1

Sobic.006G229901.1


Description : S-locus lectin protein kinase family protein


Gene families : OG_01_0000022 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000022_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G229901.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G229901.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_11
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_12


Type GO Term Name Evidence Source
BP GO:0048544 recognition of pollen ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001480 Bulb-type_lectin_dom CDD 80 198
IPR036426 Bulb-type_lectin_dom_sf SUPERFAMILY 119 229
IPR000858 S_locus_glycoprot_dom Pfam 257 368
IPR003609 Pan_app SMART 403 486
IPR003609 Pan_app Pfam 404 473
IPR001480 Bulb-type_lectin_dom Pfam 119 224
IPR011009 Kinase-like_dom_sf SUPERFAMILY 486 576
IPR001480 Bulb-type_lectin_dom ProSiteProfiles 71 193
IPR001480 Bulb-type_lectin_dom SMART 77 198
IPR036426 Bulb-type_lectin_dom_sf Gene3D 66 196
IPR003609 Pan_app ProSiteProfiles 390 487

No CAZYmes available for this sequence

No external refs found!