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  5. Sobic.006G242000.1

Sobic.006G242000.1


Description : Granulin repeat cysteine protease family protein


Gene families : OG_01_0009190 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0009190_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G242000.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G242000.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_299
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_240


Type GO Term Name Evidence Source
BP GO:0006508 proteolysis ISM GOs from InterProScan
MF GO:0008234 cysteine-type peptidase activity ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR013201 Prot_inhib_I29 SMART 45 105
IPR037277 Granulin_sf Gene3D 369 431
IPR000668 Peptidase_C1A_C SMART 134 349
IPR000118 Granulin Pfam 383 430
IPR000118 Granulin SMART 372 429
IPR000668 Peptidase_C1A_C PRINTS 294 304
IPR000668 Peptidase_C1A_C PRINTS 152 167
IPR000668 Peptidase_C1A_C PRINTS 309 315
IPR025660 Pept_his_AS ProSitePatterns 292 302
IPR025661 Pept_asp_AS ProSitePatterns 309 328
IPR013201 Prot_inhib_I29 Pfam 46 105
IPR038765 Papain-like_cys_pep_sf SUPERFAMILY 38 349
IPR039417 Peptidase_C1A_papain-like CDD 135 348
IPR000668 Peptidase_C1A_C Pfam 134 348
IPR000169 Pept_cys_AS ProSitePatterns 152 163

No CAZYmes available for this sequence

No external refs found!