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Description : PLAT/LH2 domain-containing lipoxygenase family protein
Gene families : OG_01_0112114 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0112114_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G248300.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G248300.1 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_90 | |
| Cluster | Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_101 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 101 | 211 |
| IPR013819 | LipOase_C | ProSiteProfiles | 211 | 907 |
| IPR001024 | PLAT/LH2_dom | SMART | 77 | 209 |
| IPR000907 | LipOase | PANTHER | 34 | 906 |
| IPR013819 | LipOase_C | Pfam | 221 | 319 |
| IPR013819 | LipOase_C | Pfam | 370 | 890 |
| IPR013819 | LipOase_C | PRINTS | 538 | 555 |
| IPR013819 | LipOase_C | PRINTS | 576 | 596 |
| IPR013819 | LipOase_C | PRINTS | 556 | 573 |
| IPR001246 | LipOase_plant | PRINTS | 246 | 262 |
| IPR001246 | LipOase_plant | PRINTS | 179 | 197 |
| IPR001246 | LipOase_plant | PRINTS | 279 | 298 |
| IPR001246 | LipOase_plant | PRINTS | 204 | 225 |
| IPR001246 | LipOase_plant | PRINTS | 482 | 506 |
| IPR020834 | LipOase_CS | ProSitePatterns | 583 | 593 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 215 | 907 |
No CAZYmes available for this sequence
| No external refs found! |