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  5. Sevir.8G258500.1

Sevir.8G258500.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0019279 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0019279_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.8G258500.1 No neighbors in network
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.8G258500.1
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_70


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin ProSiteProfiles 34 232
IPR037176 Osmotin/thaumatin-like_sf Gene3D 34 234
IPR001938 Thaumatin PANTHER 11 237
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 36 232
IPR001938 Thaumatin PIRSF 178 244
IPR001938 Thaumatin PIRSF 1 185
IPR001938 Thaumatin SMART 37 232
IPR001938 Thaumatin Pfam 41 180
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 246 6.5e-21 41 179
No external refs found!