Sobic.006G271100.1

Description : O-Glycosyl hydrolases family 17 protein

Gene families : OG_01_0016805 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0016805_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G271100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G271100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_15
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_165

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0004553	hydrolase activity, hydrolyzing O-glycosyl compounds	ISM	GOs from InterProScan
BP	GO:0005975	carbohydrate metabolic process	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
MF	GO:0016787	hydrolase activity	None	Extended
MF	GO:0016798	hydrolase activity, acting on glycosyl bonds	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR012946	X8	Pfam	378	449
IPR000490	Glyco_hydro_17	Pfam	31	347
IPR012946	X8	SMART	378	463
IPR044965	Glyco_hydro_17_plant	PANTHER	19	456
IPR017853	Glycoside_hydrolase_SF	SUPERFAMILY	31	348
IPR000490	Glyco_hydro_17	ProSitePatterns	262	275

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
CBM43	83	465	4.1e-29	379	462
GH17	311	465	1.3e-96	31	347

External Links

No external refs found!