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  5. Sobic.006G277200.1

Sobic.006G277200.1


Description : tubby like protein 1


Gene families : OG_01_0012316 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012316_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G277200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G277200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_182
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_32


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR000007 Tubby_C Pfam 112 448
IPR025659 Tubby-like_C SUPERFAMILY 100 453
IPR018066 Tubby_C_CS ProSitePatterns 438 453
IPR000007 Tubby_C PRINTS 234 261
IPR000007 Tubby_C PRINTS 167 183
IPR000007 Tubby_C PRINTS 183 207
IPR000007 Tubby_C PRINTS 336 353
IPR000007 Tubby_C PRINTS 354 370
IPR000007 Tubby_C PRINTS 410 429
IPR000007 Tubby_C PRINTS 431 453
IPR025659 Tubby-like_C Gene3D 111 447
IPR036047 F-box-like_dom_sf SUPERFAMILY 46 107
IPR001810 F-box_dom Pfam 51 98
IPR018066 Tubby_C_CS ProSitePatterns 354 367

No CAZYmes available for this sequence

No external refs found!