1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.006G280400.2

Sobic.006G280400.2


Description : FORMS APLOID AND BINUCLEATE CELLS 1A


Gene families : OG_01_0014728 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0014728_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.006G280400.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.006G280400.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_276
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_82


Type GO Term Name Evidence Source
MF GO:0000285 1-phosphatidylinositol-3-phosphate 5-kinase activity ISM GOs from InterProScan
MF GO:0005524 ATP binding ISM GOs from InterProScan
MF GO:0016307 obsolete phosphatidylinositol phosphate kinase activity ISM GOs from InterProScan
MF GO:0016887 ATP hydrolysis activity ISM GOs from InterProScan
BP GO:0046488 phosphatidylinositol metabolic process ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002423 Cpn60/GroEL/TCP-1 Pfam 170 416
IPR002498 PInositol-4-P-4/5-kinase_core SMART 1174 1464
IPR044769 PIKfyve_PIPKc CDD 1205 1463
IPR002498 PInositol-4-P-4/5-kinase_core ProSiteProfiles 1142 1463
IPR002498 PInositol-4-P-4/5-kinase_core Pfam 1243 1407
IPR027484 PInositol-4-P-5-kinase_N Gene3D 1156 1322
IPR027409 GroEL-like_apical_dom_sf SUPERFAMILY 223 396
IPR027409 GroEL-like_apical_dom_sf Gene3D 221 396

No CAZYmes available for this sequence

No external refs found!