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  5. Sobic.007G028100.1

Sobic.007G028100.1


Description : transducin family protein / WD-40 repeat family protein


Gene families : OG_01_0003294 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003294_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G028100.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G028100.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_305
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_51


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR006594 LisH ProSiteProfiles 61 93
IPR001680 WD40_rpt ProSiteProfiles 267 308
IPR001680 WD40_rpt SMART 305 344
IPR001680 WD40_rpt SMART 429 467
IPR001680 WD40_rpt SMART 260 299
IPR001680 WD40_rpt SMART 347 385
IPR001680 WD40_rpt SMART 516 556
IPR001680 WD40_rpt SMART 471 513
IPR001680 WD40_rpt SMART 387 427
IPR006595 CTLH_C SMART 94 151
IPR019775 WD40_repeat_CS ProSitePatterns 286 300
IPR001680 WD40_rpt ProSiteProfiles 312 353
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 258 555
IPR006595 CTLH_C ProSiteProfiles 99 151
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 255 519
IPR001680 WD40_rpt Pfam 477 512
IPR001680 WD40_rpt Pfam 263 298
IPR001680 WD40_rpt Pfam 348 385
IPR001680 WD40_rpt Pfam 518 555
IPR001680 WD40_rpt Pfam 310 344
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 520 583
IPR001680 WD40_rpt ProSiteProfiles 523 565

No CAZYmes available for this sequence

No external refs found!