Sobic.007G031600.1

Description : Zinc finger C-x8-C-x5-C-x3-H type family protein

Gene families : OG_01_0003770 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003770_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G031600.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G031600.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_101
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_187

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	ISM	GOs from InterProScan

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR041367	Znf-CCCH_4	Pfam	207	227
IPR036855	Znf_CCCH_sf	SUPERFAMILY	355	379
IPR000571	Znf_CCCH	ProSiteProfiles	354	381
IPR000571	Znf_CCCH	Pfam	299	320
IPR000571	Znf_CCCH	SMART	204	229
IPR000571	Znf_CCCH	SMART	296	321
IPR000571	Znf_CCCH	SMART	354	380
IPR000571	Znf_CCCH	ProSiteProfiles	203	230
IPR000571	Znf_CCCH	ProSiteProfiles	295	322

No CAZYmes available for this sequence

External Links

No external refs found!