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  5. Sobic.007G032400.2

Sobic.007G032400.2


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008228 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008228_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G032400.2
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G032400.2
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_105
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_231


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt Pfam 238 275
IPR001680 WD40_rpt Pfam 289 321
IPR019775 WD40_repeat_CS ProSitePatterns 262 276
IPR020472 G-protein_beta_WD-40_rep PRINTS 371 385
IPR020472 G-protein_beta_WD-40_rep PRINTS 308 322
IPR020472 G-protein_beta_WD-40_rep PRINTS 262 276
IPR001680 WD40_rpt ProSiteProfiles 288 323
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 152 483
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 142 486
IPR001680 WD40_rpt SMART 442 483
IPR001680 WD40_rpt SMART 187 232
IPR001680 WD40_rpt SMART 278 321
IPR001680 WD40_rpt SMART 235 275
IPR001680 WD40_rpt SMART 396 437
IPR001680 WD40_rpt SMART 347 384
IPR001680 WD40_rpt ProSiteProfiles 242 284

No CAZYmes available for this sequence

No external refs found!