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  5. Sobic.007G032500.1

Sobic.007G032500.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0008228 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0008228_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G032500.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G032500.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_264
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_283


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001680 WD40_rpt ProSiteProfiles 186 228
IPR019775 WD40_repeat_CS ProSitePatterns 206 220
IPR020472 G-protein_beta_WD-40_rep PRINTS 206 220
IPR020472 G-protein_beta_WD-40_rep PRINTS 414 428
IPR020472 G-protein_beta_WD-40_rep PRINTS 252 266
IPR001680 WD40_rpt ProSiteProfiles 232 267
IPR001680 WD40_rpt SMART 222 265
IPR001680 WD40_rpt SMART 179 219
IPR001680 WD40_rpt SMART 340 381
IPR001680 WD40_rpt SMART 386 427
IPR001680 WD40_rpt SMART 291 328
IPR001680 WD40_rpt Pfam 233 265
IPR001680 WD40_rpt Pfam 183 219
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 87 430
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 90 427

No CAZYmes available for this sequence

No external refs found!