Sobic.007G035500.1

Description : Pyridoxal phosphate (PLP)-dependent transferases superfamily protein

Gene families : OG_01_0001233 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001233_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G035500.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G035500.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_59
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_28

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
BP	GO:0006082	organic acid metabolic process	None	Extended
BP	GO:0006520	amino acid metabolic process	ISM	GOs from InterProScan
BP	GO:0006807	nitrogen compound metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0016829	lyase activity	None	Extended
MF	GO:0016830	carbon-carbon lyase activity	ISM	GOs from InterProScan
MF	GO:0016831	carboxy-lyase activity	ISM	GOs from InterProScan
BP	GO:0019752	carboxylic acid metabolic process	ISM	GOs from InterProScan
MF	GO:0019842	vitamin binding	None	Extended
MF	GO:0030170	pyridoxal phosphate binding	ISM	GOs from InterProScan
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
BP	GO:0043436	oxoacid metabolic process	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044281	small molecule metabolic process	None	Extended
MF	GO:0070279	vitamin B6 binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended
BP	GO:1901564	organonitrogen compound metabolic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR021115	Pyridoxal-P_BS	ProSitePatterns	324	345
IPR015421	PyrdxlP-dep_Trfase_major	Gene3D	106	407
IPR010977	Aromatic_deC	PRINTS	53	70
IPR010977	Aromatic_deC	PRINTS	71	90
IPR010977	Aromatic_deC	PRINTS	423	442
IPR010977	Aromatic_deC	PRINTS	168	188
IPR010977	Aromatic_deC	PRINTS	380	395
IPR010977	Aromatic_deC	PRINTS	30	49
IPR010977	Aromatic_deC	PRINTS	118	136
IPR010977	Aromatic_deC	PRINTS	97	116
IPR015424	PyrdxlP-dep_Trfase	SUPERFAMILY	26	511
IPR002129	PyrdxlP-dep_de-COase	Pfam	59	442
IPR015422	PyrdxlP-dep_Trfase_small	Gene3D	408	518

No CAZYmes available for this sequence

External Links

No external refs found!