Sobic.007G043300.2

Description : Cupredoxin superfamily protein

Gene families : OG_01_0001886 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001886_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G043300.2
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G043300.2	No neighbors in network
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_27

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005507	copper ion binding	ISM	GOs from InterProScan
MF	GO:0016491	oxidoreductase activity	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR008972	Cupredoxin	SUPERFAMILY	66	263
IPR008972	Cupredoxin	Gene3D	1	58
IPR011707	Cu-oxidase-like_N	Pfam	2	60
IPR001117	Cu-oxidase_2nd	Pfam	73	224
IPR008972	Cupredoxin	SUPERFAMILY	289	461
IPR011706	Cu-oxidase_C	Pfam	309	442
IPR008972	Cupredoxin	Gene3D	273	472
IPR008972	Cupredoxin	Gene3D	70	262
IPR045087	Cu-oxidase_fam	PANTHER	2	476
IPR008972	Cupredoxin	SUPERFAMILY	6	86

HMM Family	HMM Length	Query Length	e-Value	Query Start	Query End
AA1	358	506	4.3e-58	3	425

External Links

No external refs found!