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  5. Sobic.007G046900.1

Sobic.007G046900.1


Description : BTB-POZ and MATH domain 1


Gene families : OG_01_0001962 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001962_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G046900.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G046900.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_221
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_239


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR008974 TRAF-like Gene3D 16 140
IPR000210 BTB/POZ_dom SMART 165 269
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 148 267
IPR011333 SKP1/BTB/POZ_sf Gene3D 143 262
IPR002083 MATH/TRAF_dom Pfam 31 132
IPR000210 BTB/POZ_dom Pfam 157 268
IPR000210 BTB/POZ_dom ProSiteProfiles 165 232
IPR002083 MATH/TRAF_dom CDD 26 136
IPR045005 BPM1-6 PANTHER 9 328
IPR002083 MATH/TRAF_dom ProSiteProfiles 9 136

No CAZYmes available for this sequence

No external refs found!