Sobic.007G075800.1

Description : GTP-binding family protein

Gene families : OG_01_0004622 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0004622_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G075800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G075800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_137
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_166

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003723	RNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0005525	GTP binding	ISM	GOs from InterProScan
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0019001	guanyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032561	guanyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR015946	KH_dom-like_a/b	Gene3D	335	435
IPR004044	KH_dom_type_2	Pfam	357	432
IPR030388	G_ERA_dom	ProSiteProfiles	145	326
IPR027417	P-loop_NTPase	Gene3D	139	330
IPR004044	KH_dom_type_2	ProSiteProfiles	354	431
IPR027417	P-loop_NTPase	SUPERFAMILY	147	362
IPR005225	Small_GTP-bd_dom	TIGRFAM	148	317
IPR009019	KH_sf_prok-type	SUPERFAMILY	332	432
IPR030388	G_ERA_dom	CDD	146	321
IPR006073	GTP-bd	Pfam	149	273
IPR005662	GTPase_Era	PANTHER	42	431
IPR005662	GTPase_Era	TIGRFAM	148	428
IPR005662	GTPase_Era	Hamap	144	435

No CAZYmes available for this sequence

External Links

No external refs found!