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  5. Sobic.007G082500.1

Sobic.007G082500.1


Description : BTB-POZ and MATH domain 2


Gene families : OG_01_0055300 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0055300_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G082500.1
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_125


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR002083 MATH/TRAF_dom CDD 26 146
IPR000210 BTB/POZ_dom ProSiteProfiles 184 247
IPR002083 MATH/TRAF_dom ProSiteProfiles 22 146
IPR000210 BTB/POZ_dom Pfam 178 287
IPR000210 BTB/POZ_dom SMART 184 289
IPR011333 SKP1/BTB/POZ_sf Gene3D 162 289
IPR045005 BPM1-6 PANTHER 2 356
IPR008974 TRAF-like Gene3D 22 150
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 162 287

No CAZYmes available for this sequence

No external refs found!