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  5. Sevir.9G003700.1

Sevir.9G003700.1


Description : Transducin/WD40 repeat-like superfamily protein


Gene families : OG_01_0006395 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0006395_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G003700.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G003700.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_163
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_103


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR036322 WD40_repeat_dom_sf SUPERFAMILY 206 554
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 464 557
IPR001680 WD40_rpt ProSiteProfiles 209 250
IPR001680 WD40_rpt Pfam 207 240
IPR001680 WD40_rpt Pfam 415 449
IPR019775 WD40_repeat_CS ProSitePatterns 436 450
IPR001680 WD40_rpt ProSiteProfiles 417 451
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 194 328
IPR015943 WD40/YVTN_repeat-like_dom_sf Gene3D 329 463
IPR001680 WD40_rpt SMART 507 555
IPR001680 WD40_rpt SMART 202 241
IPR001680 WD40_rpt SMART 360 399
IPR001680 WD40_rpt SMART 312 357
IPR001680 WD40_rpt SMART 410 449

No CAZYmes available for this sequence

No external refs found!