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  5. Sevir.9G006300.1

Sevir.9G006300.1


Description : RNA-binding (RRM/RBD/RNP motifs) family protein


Gene families : OG_01_0001172 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0001172_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.9G006300.1
Neighborhood Setaria viridis coexpression network - Anderson et al (2021): Sevir.9G006300.1
Cluster Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_7
Cluster Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_73


Type GO Term Name Evidence Source
MF GO:0003676 nucleic acid binding ISM GOs from InterProScan
MF GO:0003723 RNA binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR035979 RBD_domain_sf SUPERFAMILY 243 329
IPR000504 RRM_dom SMART 137 226
IPR000504 RRM_dom SMART 247 323
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 56 237
IPR035979 RBD_domain_sf SUPERFAMILY 131 238
IPR012677 Nucleotide-bd_a/b_plait_sf Gene3D 242 349
IPR000504 RRM_dom ProSiteProfiles 136 230
IPR000504 RRM_dom ProSiteProfiles 246 327
IPR000504 RRM_dom Pfam 248 317

No CAZYmes available for this sequence

No external refs found!