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  5. Sobic.007G121400.1

Sobic.007G121400.1


Description : SU(VAR)3-9 homolog 6


Gene families : OG_01_0026207 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0026207_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G121400.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G121400.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_174
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_150


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
CC GO:0005634 nucleus ISM GOs from InterProScan
MF GO:0008270 zinc ion binding ISM GOs from InterProScan
BP GO:0016571 histone methylation ISM GOs from InterProScan
MF GO:0018024 obsolete histone lysine N-methyltransferase activity ISM GOs from InterProScan
BP GO:0034968 histone lysine methylation ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR007728 Pre-SET_dom Pfam 853 948
IPR001214 SET_dom Pfam 967 1100
IPR003105 SRA_YDG ProSiteProfiles 673 824
IPR036987 SRA-YDG_sf Gene3D 656 843
IPR003105 SRA_YDG SMART 666 828
IPR007728 Pre-SET_dom SMART 850 940
IPR025794 H3-K9-MeTrfase_plant ProSiteProfiles 516 1131
IPR003105 SRA_YDG Pfam 672 828
IPR001214 SET_dom ProSiteProfiles 956 1100
IPR001214 SET_dom SMART 956 1106
IPR007728 Pre-SET_dom ProSiteProfiles 893 953
IPR015947 PUA-like_sf SUPERFAMILY 657 836

No CAZYmes available for this sequence

No external refs found!