Sevir.1G291200.1

Description : Transducin family protein / WD-40 repeat family protein

Gene families : OG_01_0000388 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000388_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Setaria viridis coexpression network - v0.2 (X-meeting 2023): Sevir.1G291200.1
Neighborhood	Setaria viridis coexpression network - Anderson et al (2021): Sevir.1G291200.1
Cluster	Setaria viridis HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_27
Cluster	Setaria viridis HCCA coexpression clusters - Anderson et al (2021): Cluster_49

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005515	protein binding	ISM	GOs from InterProScan
MF	GO:0008047	enzyme activator activity	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009893	positive regulation of metabolic process	None	Extended
BP	GO:0010604	positive regulation of macromolecule metabolic process	None	Extended
MF	GO:0010997	anaphase-promoting complex binding	ISM	GOs from InterProScan
BP	GO:0019222	regulation of metabolic process	None	Extended
MF	GO:0030234	enzyme regulator activity	None	Extended
BP	GO:0031396	regulation of protein ubiquitination	None	Extended
BP	GO:0031398	positive regulation of protein ubiquitination	None	Extended
BP	GO:0031399	regulation of protein modification process	None	Extended
BP	GO:0031401	positive regulation of protein modification process	None	Extended
BP	GO:0043085	positive regulation of catalytic activity	None	Extended
BP	GO:0044093	positive regulation of molecular function	None	Extended
MF	GO:0044877	protein-containing complex binding	None	Extended
BP	GO:0048518	positive regulation of biological process	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050790	regulation of catalytic activity	None	Extended
BP	GO:0051171	regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051173	positive regulation of nitrogen compound metabolic process	None	Extended
BP	GO:0051246	regulation of protein metabolic process	None	Extended
BP	GO:0051247	positive regulation of protein metabolic process	None	Extended
BP	GO:0051338	regulation of transferase activity	None	Extended
BP	GO:0051347	positive regulation of transferase activity	None	Extended
BP	GO:0051438	regulation of ubiquitin-protein transferase activity	None	Extended
BP	GO:0051443	positive regulation of ubiquitin-protein transferase activity	None	Extended
MF	GO:0055106	ubiquitin-protein transferase regulator activity	None	Extended
BP	GO:0060255	regulation of macromolecule metabolic process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
BP	GO:0065009	regulation of molecular function	None	Extended
BP	GO:0080090	regulation of primary metabolic process	None	Extended
MF	GO:0097027	ubiquitin-protein transferase activator activity	ISM	GOs from InterProScan
MF	GO:0098772	molecular function regulator activity	None	Extended
MF	GO:0140677	molecular function activator activity	None	Extended
BP	GO:1901873	regulation of post-translational protein modification	None	Extended
BP	GO:1901875	positive regulation of post-translational protein modification	None	Extended
BP	GO:1903320	regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1903322	positive regulation of protein modification by small protein conjugation or removal	None	Extended
BP	GO:1904666	regulation of ubiquitin protein ligase activity	None	Extended
BP	GO:1904668	positive regulation of ubiquitin protein ligase activity	ISM	GOs from InterProScan

Toggle parental

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR001680	WD40_rpt	ProSiteProfiles	191	232
IPR019775	WD40_repeat_CS	ProSitePatterns	433	447
IPR015943	WD40/YVTN_repeat-like_dom_sf	Gene3D	99	449
IPR001680	WD40_rpt	ProSiteProfiles	414	447
IPR011047	Quinoprotein_ADH-like_supfam	SUPERFAMILY	148	448
IPR001680	WD40_rpt	Pfam	272	307
IPR001680	WD40_rpt	Pfam	323	361
IPR001680	WD40_rpt	Pfam	412	446
IPR033010	Cdc20/Fizzy	PANTHER	3	473
IPR024977	Apc4-like_WD40_dom	Pfam	190	248
IPR001680	WD40_rpt	SMART	184	223
IPR001680	WD40_rpt	SMART	226	264
IPR001680	WD40_rpt	SMART	407	446
IPR001680	WD40_rpt	SMART	268	307
IPR001680	WD40_rpt	SMART	364	404
IPR001680	WD40_rpt	SMART	319	361
IPR019775	WD40_repeat_CS	ProSitePatterns	294	308
IPR001680	WD40_rpt	ProSiteProfiles	275	316

No CAZYmes available for this sequence

External Links

No external refs found!

Sevir.1G291200.1

Expression Profile

Co-expression Networks

Functional Annotation