Sobic.007G138100.1

Description : A20/AN1-like zinc finger family protein

Gene families : OG_01_0005029 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0005029_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G138100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G138100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_75
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_4

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0008270	zinc ion binding	ISM	GOs from InterProScan
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
MF	GO:0046914	transition metal ion binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR000058	Znf_AN1	Pfam	191	227
IPR000058	Znf_AN1	ProSiteProfiles	188	231
IPR000058	Znf_AN1	SMART	191	228
IPR002653	Znf_A20	Pfam	117	139
IPR002653	Znf_A20	Pfam	15	37
IPR002653	Znf_A20	ProSiteProfiles	10	44
IPR035896	AN1-like_Znf	Gene3D	165	246
IPR002653	Znf_A20	SMART	13	37
IPR002653	Znf_A20	SMART	115	140
IPR035896	AN1-like_Znf	SUPERFAMILY	181	244
IPR002653	Znf_A20	ProSiteProfiles	112	147

No CAZYmes available for this sequence

External Links

No external refs found!