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  5. Sobic.007G152800.1

Sobic.007G152800.1


Description : glutamate decarboxylase


Gene families : OG_01_0000602 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000602_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G152800.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G152800.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_111
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_85


Type GO Term Name Evidence Source
MF GO:0003824 catalytic activity ISM GOs from InterProScan
MF GO:0004351 glutamate decarboxylase activity ISM GOs from InterProScan
BP GO:0006536 glutamate metabolic process ISM GOs from InterProScan
MF GO:0016830 carbon-carbon lyase activity ISM GOs from InterProScan
BP GO:0019752 carboxylic acid metabolic process ISM GOs from InterProScan
MF GO:0030170 pyridoxal phosphate binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR015424 PyrdxlP-dep_Trfase SUPERFAMILY 110 543
IPR015421 PyrdxlP-dep_Trfase_major Gene3D 165 458
IPR010107 Glutamate_decarboxylase PANTHER 99 598
IPR002129 PyrdxlP-dep_de-COase Pfam 132 480
IPR010107 Glutamate_decarboxylase TIGRFAM 115 543

No CAZYmes available for this sequence

No external refs found!