Sobic.007G187100.1

Description : terpene synthase 21

Gene families : OG_01_0000714 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000714_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G187100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_8

Type	GO Term	Name	Evidence	Source
MF	GO:0000287	magnesium ion binding	ISM	GOs from InterProScan
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003824	catalytic activity	None	Extended
MF	GO:0005488	binding	None	Extended
BP	GO:0006629	lipid metabolic process	None	Extended
BP	GO:0006720	isoprenoid metabolic process	None	Extended
BP	GO:0006721	terpenoid metabolic process	None	Extended
BP	GO:0008150	biological_process	None	Extended
BP	GO:0008152	metabolic process	None	Extended
BP	GO:0008299	isoprenoid biosynthetic process	None	Extended
BP	GO:0008610	lipid biosynthetic process	None	Extended
BP	GO:0009058	biosynthetic process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0010333	terpene synthase activity	ISM	GOs from InterProScan
BP	GO:0016101	diterpenoid metabolic process	None	Extended
BP	GO:0016102	diterpenoid biosynthetic process	ISM	GOs from InterProScan
BP	GO:0016114	terpenoid biosynthetic process	None	Extended
MF	GO:0016829	lyase activity	ISM	GOs from InterProScan
MF	GO:0016835	carbon-oxygen lyase activity	None	Extended
MF	GO:0016838	carbon-oxygen lyase activity, acting on phosphates	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
BP	GO:0044237	cellular metabolic process	None	Extended
BP	GO:0044238	primary metabolic process	None	Extended
BP	GO:0044249	cellular biosynthetic process	None	Extended
BP	GO:0044255	cellular lipid metabolic process	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0071704	organic substance metabolic process	None	Extended
BP	GO:1901576	organic substance biosynthetic process	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR034741	Terpene_cyclase-like_1_C	SFLD	235	552
IPR001906	Terpene_synth_N	Pfam	31	209
IPR008949	Isoprenoid_synthase_dom_sf	Gene3D	30	545
IPR008930	Terpenoid_cyclase/PrenylTrfase	SUPERFAMILY	29	235
IPR044814	Terpene_cyclase_plant_C1	CDD	24	565
IPR005630	Terpene_synthase_metal-bd	Pfam	240	505
IPR036965	Terpene_synth_N_sf	Gene3D	72	235
IPR008949	Isoprenoid_synthase_dom_sf	SUPERFAMILY	235	548

No CAZYmes available for this sequence

External Links

No external refs found!