1. Home
  2. Species
  3. Sorghum bicolor
  4. Sequence
  5. Sobic.007G198600.1

Sobic.007G198600.1


Description : BTB-POZ and MATH domain 2


Gene families : OG_01_0000261 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000261_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


Download

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G198600.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G198600.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_48
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_532


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
BP GO:0016567 protein ubiquitination ISM GOs from InterProScan
Toggle parental
Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR011333 SKP1/BTB/POZ_sf SUPERFAMILY 151 273
IPR000210 BTB/POZ_dom SMART 171 275
IPR000210 BTB/POZ_dom Pfam 164 271
IPR008974 TRAF-like Gene3D 9 145
IPR002083 MATH/TRAF_dom CDD 11 139
IPR000210 BTB/POZ_dom ProSiteProfiles 171 238
IPR002083 MATH/TRAF_dom Pfam 32 139
IPR011333 SKP1/BTB/POZ_sf Gene3D 147 269
IPR045005 BPM1-6 PANTHER 7 336
IPR002083 MATH/TRAF_dom ProSiteProfiles 10 141

No CAZYmes available for this sequence

No external refs found!