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  5. Sobic.007G201200.1

Sobic.007G201200.1


Description : Pathogenesis-related thaumatin superfamily protein


Gene families : OG_01_0000062 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0000062_tree

Sequence : cds (download), rna (download), protein (download)


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G201200.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G201200.1
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_70
Cluster Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_119


Type GO Term Name Evidence Source

No GO annotation available for this sequence
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR001938 Thaumatin Pfam 38 257
IPR001938 Thaumatin ProSiteProfiles 31 257
IPR037176 Osmotin/thaumatin-like_sf Gene3D 32 258
IPR001938 Thaumatin SMART 34 258
IPR001938 Thaumatin PRINTS 94 123
IPR001938 Thaumatin PRINTS 81 92
IPR001938 Thaumatin PRINTS 248 257
IPR001938 Thaumatin PRINTS 33 45
IPR001938 Thaumatin PANTHER 15 286
IPR017949 Thaumatin_CS ProSitePatterns 94 109
IPR037176 Osmotin/thaumatin-like_sf SUPERFAMILY 33 257
HMM Family HMM Length Query Length e-Value Query Start Query End
GH152 216 399 1.2e-85 38 257
No external refs found!