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Description : lipoxygenase 2
Gene families : OG_01_0015626 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0015626_tree
Sequence : cds (download), rna (download), protein (download)
Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.
| Type | Description | Actions |
|---|---|---|
| Neighborhood | Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G210400.1 | |
| Neighborhood | Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G210400.1 | No neighbors in network |
| Cluster | Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_35 |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
| MF | GO:0005515 | protein binding | ISM | GOs from InterProScan |
| MF | GO:0016491 | oxidoreductase activity | ISM | GOs from InterProScan |
| MF | GO:0016702 | oxidoreductase activity, acting on single donors with incorporation of molecular oxygen, incorporation of two atoms of oxygen | ISM | GOs from InterProScan |
| MF | GO:0046872 | metal ion binding | ISM | GOs from InterProScan |
| Type | GO Term | Name | Evidence | Source |
|---|---|---|---|---|
No Predicted GO terms available for this sequence |
| InterPro domains | Description | Source | Start | Stop |
|---|---|---|---|---|
| IPR013819 | LipOase_C | ProSiteProfiles | 168 | 865 |
| IPR020833 | LipOase_Fe_BS | ProSitePatterns | 517 | 531 |
| IPR020834 | LipOase_CS | ProSitePatterns | 544 | 554 |
| IPR013819 | LipOase_C | PRINTS | 537 | 557 |
| IPR013819 | LipOase_C | PRINTS | 499 | 516 |
| IPR013819 | LipOase_C | PRINTS | 517 | 534 |
| IPR000907 | LipOase | PANTHER | 6 | 864 |
| IPR027433 | Lipoxygenase_dom_3 | Gene3D | 289 | 378 |
| IPR013819 | LipOase_C | Pfam | 177 | 848 |
| IPR001246 | LipOase_plant | PRINTS | 161 | 182 |
| IPR001246 | LipOase_plant | PRINTS | 347 | 363 |
| IPR001246 | LipOase_plant | PRINTS | 200 | 216 |
| IPR001246 | LipOase_plant | PRINTS | 299 | 320 |
| IPR001246 | LipOase_plant | PRINTS | 386 | 405 |
| IPR001246 | LipOase_plant | PRINTS | 454 | 478 |
| IPR001246 | LipOase_plant | PRINTS | 778 | 792 |
| IPR001246 | LipOase_plant | PRINTS | 234 | 253 |
| IPR001024 | PLAT/LH2_dom | ProSiteProfiles | 10 | 162 |
| IPR001024 | PLAT/LH2_dom | SMART | 10 | 166 |
| IPR042057 | Lipoxy_PLAT/LH2 | CDD | 6 | 166 |
| IPR036226 | LipOase_C_sf | SUPERFAMILY | 170 | 865 |
| IPR036392 | PLAT/LH2_dom_sf | SUPERFAMILY | 8 | 169 |
No CAZYmes available for this sequence
| No external refs found! |