Sobic.007G215800.1

Description : wall-associated kinase 2

Gene families : OG_01_0012129 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0012129_tree

Sequence : cds (download), rna (download), protein (download)

Attention: This gene has low abundance.

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G215800.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G215800.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_18
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_15

Type	GO Term	Name	Evidence	Source
MF	GO:0000166	nucleotide binding	None	Extended
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0005488	binding	None	Extended
MF	GO:0005509	calcium ion binding	ISM	GOs from InterProScan
MF	GO:0005524	ATP binding	ISM	GOs from InterProScan
BP	GO:0007165	signal transduction	None	Extended
BP	GO:0007166	cell surface receptor signaling pathway	ISM	GOs from InterProScan
BP	GO:0008150	biological_process	None	Extended
BP	GO:0009987	cellular process	None	Extended
MF	GO:0017076	purine nucleotide binding	None	Extended
MF	GO:0030246	carbohydrate binding	None	Extended
MF	GO:0030247	polysaccharide binding	ISM	GOs from InterProScan
MF	GO:0030554	adenyl nucleotide binding	None	Extended
MF	GO:0032553	ribonucleotide binding	None	Extended
MF	GO:0032555	purine ribonucleotide binding	None	Extended
MF	GO:0032559	adenyl ribonucleotide binding	None	Extended
MF	GO:0035639	purine ribonucleoside triphosphate binding	None	Extended
MF	GO:0036094	small molecule binding	None	Extended
MF	GO:0043167	ion binding	None	Extended
MF	GO:0043168	anion binding	None	Extended
MF	GO:0043169	cation binding	None	Extended
MF	GO:0046872	metal ion binding	None	Extended
BP	GO:0050789	regulation of biological process	None	Extended
BP	GO:0050794	regulation of cellular process	None	Extended
BP	GO:0065007	biological regulation	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended
MF	GO:0097367	carbohydrate derivative binding	None	Extended
MF	GO:1901265	nucleoside phosphate binding	None	Extended
MF	GO:1901363	heterocyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR018097	EGF_Ca-bd_CS	ProSitePatterns	360	385
IPR026823	cEGF	Pfam	339	363
IPR000742	EGF-like_dom	ProSiteProfiles	317	354
IPR001881	EGF-like_Ca-bd_dom	SMART	360	402
IPR001881	EGF-like_Ca-bd_dom	SMART	317	359
IPR011009	Kinase-like_dom_sf	SUPERFAMILY	444	516
IPR045274	WAK-like	PANTHER	19	335
IPR045274	WAK-like	PANTHER	337	438
IPR045274	WAK-like	PANTHER	440	515
IPR013032	EGF-like_CS	Pfam	374	390
IPR017441	Protein_kinase_ATP_BS	ProSitePatterns	473	495
IPR000152	EGF-type_Asp/Asn_hydroxyl_site	ProSitePatterns	376	387
IPR000152	EGF-type_Asp/Asn_hydroxyl_site	ProSitePatterns	333	344
IPR025287	WAK_GUB	Pfam	43	103
IPR000742	EGF-like_dom	SMART	363	402
IPR000742	EGF-like_dom	SMART	320	359
IPR000742	EGF-like_dom	SMART	278	316

No CAZYmes available for this sequence

External Links

No external refs found!