Sobic.007G225100.1

Description : methyl-CPG-binding domain 8

Gene families : OG_01_0003599 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003599_tree

Sequence : cds (download), rna (download), protein (download)

Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.

Type	Description	Actions
Neighborhood	Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.007G225100.1
Neighborhood	Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.007G225100.1
Cluster	Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_322
Cluster	Sorghum bicolor HCCA coexpression clusters - Leiboff and Hake (2019): Cluster_80

Type	GO Term	Name	Evidence	Source
MF	GO:0003674	molecular_function	None	Extended
MF	GO:0003676	nucleic acid binding	None	Extended
MF	GO:0003677	DNA binding	ISM	GOs from InterProScan
MF	GO:0005488	binding	None	Extended
MF	GO:0097159	organic cyclic compound binding	None	Extended

Type	GO Term	Name	Evidence	Source
No Predicted GO terms available for this sequence

InterPro domains	Description	Source	Start	Stop
IPR013087	Znf_C2H2_type	ProSitePatterns	379	399
IPR016177	DNA-bd_dom_sf	SUPERFAMILY	206	255
IPR013087	Znf_C2H2_type	SMART	377	399
IPR013087	Znf_C2H2_type	SMART	331	354
IPR001739	Methyl_CpG_DNA-bd	Pfam	211	255
IPR013087	Znf_C2H2_type	ProSiteProfiles	377	404
IPR037472	MBD8	PANTHER	1	1192
IPR013087	Znf_C2H2_type	ProSiteProfiles	331	359
IPR001739	Methyl_CpG_DNA-bd	ProSiteProfiles	201	274
IPR013087	Znf_C2H2_type	ProSitePatterns	333	354

No CAZYmes available for this sequence

External Links

No external refs found!