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  5. Sobic.008G006700.1

Sobic.008G006700.1


Description : Trypsin family protein with PDZ domain


Gene families : OG_01_0003421 (OrthoFinder Gene Families v0.3) Phylogenetic Tree(s): OG0003421_tree

Sequence : cds (download), rna (download), protein (download)


Attention: This gene has low abundance.


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Note:Only the main profile, including all conditions, is shown. Additional statistics and tissue specific profiles are available here.


Type Description Actions
Neighborhood Sorghum bicolor coexpression network - v0.2 (X-meeting 2023): Sobic.008G006700.1
Neighborhood Sorghum bicolor coexpression nextwork - Leiboff and Hake 2019: Sobic.008G006700.1 No neighbors in network
Cluster Sorghum bicolor HCCA coexpression clusters - v0.2 (X-meeting 2023): Cluster_127


Type GO Term Name Evidence Source
MF GO:0005515 protein binding ISM GOs from InterProScan
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Type GO Term Name Evidence Source

No Predicted GO terms available for this sequence
InterPro domains Description Source Start Stop
IPR043504 Peptidase_S1_PA_chymotrypsin Gene3D 148 305
IPR001478 PDZ ProSiteProfiles 341 377
IPR043504 Peptidase_S1_PA_chymotrypsin Gene3D 226 297
IPR009003 Peptidase_S1_PA SUPERFAMILY 114 310
IPR041489 PDZ_6 Pfam 348 379
IPR036034 PDZ_sf SUPERFAMILY 305 388
IPR036034 PDZ_sf Gene3D 319 411
IPR001478 PDZ SMART 322 403

No CAZYmes available for this sequence

No external refs found!